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Chih-Chieh Wu, Ph.D.

Present Title & Affiliation

Primary Appointment

Assistant Professor, Department of Epidemiology, Division of OVP, Cancer Prevention and Population Sciences, The University of Texas MD Anderson Cancer Center, Houston, TX

Bio Statement

Chih-Chieh Wu, PhD, was trained with Applied Mathematics and Statistics in the State University of New York at Stony Brook and later underwent post-doctoral training in Human Genetics and Genetic Epidemiology at MD Anderson Cancer Center. His primary research is to develop and implement mathematical and statistical methods for human genetic analyses in family and case-control studies. He has developed methods to precisely model the measured susceptibility genotypes for the proband and each relative in a family and incorporate this information into mathematical models. These methods determine the joint effects of individual (genetic and non-genetic) risk factors and their interactions on cancer risk simultaneously. He has applied the methods that he developed to cancer family studies of Li-Fraumeni syndrome. He has developed methods to perform genome-wide detection of deletions associated with common, complex diseases in case-control studies using dense single nucleotide polymorphisms (SNPs). He applied the methods for analyses of whole-genome SNP genotype data of rheumatoid arthritis patients. He also proposed and developed novel statistical tests based on minimum frequencies to detect unusually sparse incidences of disease. He used the theories in combinatorial mathematics to derive exact probability distributions and moments that are particularly desirable in the analyses of rare data on diseases. He extended these methods and applied them to analyses of adolescent suicide data from the U.S. National Center for Health Statistics and childhood Langerhans cell histiocytosis data from Taiwan.

Research Interests

  • Methods for Cancer Risk Analyses Relevant to Genetic, Environmental, and Epidemiological Risk Factors Combined in Family Studies
  • Methods for Detection of Gene-Gene and Gene-Environment Interactions in Family Studies
  • Methods for Genome-Wide Detection of Genomic Deletions Associated with Common, Complex Diseases
  • Family-Based Genome-Wide Association Studies
  • Combinatorial Probability Distribution Theories and Their Application to Detect Disease Anomalous Patterns in Discrete Time Series

Office Address

The University of Texas MD Anderson Cancer Center
1155 Pressler Street
Unit Number: 1340
Houston, TX 77030
Email: ccwu@mdanderson.org

Education & Training

Degree-Granting Education

2000 State University of New York at Stony Brook, Stony Brook, NY, PHD, Applied Mathematics and Statistics

Postgraduate Training

2001-2004 Research Fellowship, Epidemiology, The University of Texas MD Anderson Cancer Center, Houston, TX

Experience/Service

Academic Appointments

Instructor, Department of Epidemiology, Division of OVP, Cancer Prevention and Population Sciences, The University of Texas MD Anderson Cancer Center, Houston, TX, 2004-2007
Postdoctoral Fellow, Department of Epidemiology, Division of OVP, Cancer Prevention and Population Sciences, The University of Texas MD Anderson Cancer Center, Houston, TX, 2001-2004
Teaching Assistant, Department of Applied Mathematics and Statistics, State University of New York at Stony Brook, Stony Brook, NY, 1994-2000

Selected Publications

Peer-Reviewed Original Research Articles

1. Wu CC, Amos CI. Statistical properties of affected sib-pair linkage tests. Human Heredity 55:153-62, 2003. PMID: 14566093.
2. Wu CC, Shete S, Amos CI. Linkage analysis of affected sib pairs allowing for parent-of-origin effects. Ann Hum Genet 69(Pt 1):113-26, 1/2005. PMID: 15638832.
3. Bachinski LL, Olufemi SE, Zhou X, Wu CC, Yip L, Shete S, Lozano G, Amos CI, Strong LC, Krahe R. Genetic mapping of a third Li-Fraumeni syndrome predisposition locus to human chromosome 1q23. Cancer Res 65(2):427-31, 1/2005. PMID: 15695383.
4. Wu CC, Shete S. Analysis of genes for alcoholism using two-disease-locus models. BMC Genetics 6(suppl 1):S149, 2005. e-Pub 12/2005. PMCID: PMC1866786.
5. Wu CC, Shete S, Amos CI, Strong LC. Joint effects of germ-line p53 mutation and sex on cancer risk in Li-Fraumeni syndrome. Cancer Res 66(16):8287-92, 8/2006. PMID: 16912210.
6. Wu CC, Grimson RC, Amos CI, Shete S. Statistical methods for anomalous discrete time series based on minimum cell count. Biom J 50(1):86-96, 2/2008. PMID: 17853406.
7. Wu CC, Shete S, Chen WV, Peng B, Lee AT, Ma J, Gregersen PK, Amos CI. Detection of disease-associated deletions in case-control studies using SNP genotypes with application to rheumatoid arthritis. Hum Genet 126(2):303-15, 8/2009. e-Pub 5/2009. PMCID: PMC2992885.
8. Wu CC, Strong LC, Shete S. Effects of Measured Susceptibility Genes on Cancer Risk in Family Studies. Hum Genet 127(3):349-57, 3/2010. e-Pub 12/2009. PMCID: PMC2918266.
9. Wu CC, Grimson RC, Shete S. Exact Statistical Tests for Heterogeneity of Frequencies based on Extreme Values. Communications in Statistics - Simulation and Computation 39(3):612-23, 2010.
10. Wu CC, Krahe R, Lozano G, Zhang B, Wilson CD, Jo EJ, Amos CI, Shete S, Strong LC. Joint effects of germ-line TP53 mutation, MDM2 SNP309, and gender on cancer risk in family studies of Li-Fraumeni syndrome. Hum Genet 129(6):663-73, 6/2011. e-Pub 2/2011. PMID: 21305319.
11. Magrane D, Helitzer D, Morahan P, Chang S, Gleason K, Cardinale G, Wu CC. Systems of Career Influences: A Conceptual Model for evaluating the Professional Development of Women in Academic Medicine. Journal of Women's Health 21(12):1244-1251, 12/2012. PMID: 23101486.
12. Wu CC, Shete S, Jo EJ, Xu Y, Lu EY, Chen WV, Amos CI. Whole-Genome Detection of Disease-Associated Deletions or Excess Homozygosity in a Case-Control Study of Rheumatoid Arthritis. Human Molecular Genetics 22(6):1249-1261, 2013. PMID: 23223014.

Grant & Contract Support

Title: Genome-Wide Statistical Methods for Detecting Deletions in Case-Control Studies
Funding Source: NIH/NCI
Role: Principal Investigator
Duration: 9/1/2010 - 8/31/2013
 
Title: Innovative Multidisciplinary Education: The Statistical Genetics of Addiction
Funding Source: NIH/NIDA
Role: Program Mentor
Principal Investigator: Chang S and Shete S
Duration: 8/1/2010 - 3/31/2015
 
Title: Achieving a Critical Mass of Women Biomedical Faculty: Impact of 3 US Programs
Funding Source: NIH/NIGMS
Role: Co-Investigator
Principal Investigator: Helitzer DL
Duration: 9/20/2009 - 8/31/2013
 
Title: The Houston Laboratory and Population Sciences Training Program in Gene-Environment Interaction
Funding Source: Burroughs Wellcome Fund
Role: Core-Faculty
Principal Investigator: Caskey CT and Boerwinkle E
Duration: 2/2/2009 - 1/31/2014

Last updated: 2/21/2013