Scott D. Jewell, PhD

Peer-Reviewed Articles

1. Damico H, C Sheridan RT, Blanski AA, Escobar Galvis ML, Evans T, Williams BO, Jewell SD, Rohrer DC. Comparative Analysis of the Ficoll-Paque and Miltenyi autoMACS® PBMC Isolation Methods. Biopreserv Biobank, 2026. e-Pub 2026.
2. Kołodziejczak-Guglas, I, Simões, RL, de Souza Santos, E, Demicco, EG, Lazcano Segura, RN, Ma, W, Wang, P, Geffen, Y, Storrs, E, Petralia, F, Colaprico, A, da Veiga Leprevost, F, Pugliese, P, Ceccarelli, M, Noushmehr, H, Nesvizhskii, AI, Kaminska, B, Priebe, W, Lubinski, J, Zhang, B, Lazar, A, Kurzawa, P, Mesri, M, Robles, AI, Francis, A, Paulovich, A, Calinawan, A, Iavarone, A, Chinnaiyan, AM, Wen, B, Reva, B, Druker, BJ, Lindgren, CM, Kumar-Sinha, C, Newton, CJ, Huang, C, Birger, C, Day, C, Mani, DR, Zhou, DC, Chan, D, Fenyö, D, Heiman, DI, Rykunov, D, Huntsman, E, Schadt, EE, Jaehnig, EJ, An, E, Rodrigues, FM, Jewell, SD. Proteomic-based stemness score measures oncogenic dedifferentiation and enables the identification of druggable targets. Cell Genom 5(6), 2025. e-Pub 2025. PMID: 40250426.
3. Martins Rodrigues, F, Terekhanova, NV, Imbach, KJ, Clauser, KR, Esai Selvan, M, Mendizabal, I, Geffen, Y, Akiyama, Y, Maynard, M, Yaron, TM, Li, Y, Cao, S, Storrs, E, Gonda, OS, Gaite-Reguero, A, Govindan, A, Kawaler, E, Wyczalkowski, MA, Klein, R, Turhan, B, Krug, K, Mani, DR, Leprevost, FV, Nesvizhskii, AI, Carr, SA, Fenyö, D, Gillette, MA, Colaprico, A, Iavarone, A, Robles, AI, Huang, KL, Kumar-Sinha, C, Aguet, F, Lazar, A, Cantley, LC, Marigorta, UM, Gümüş, ZH, Bailey, M, Getz, G, Porta-Pardo, E, Ding, L, An, E, Anurag, M, Bavarva, J, Birger, C, Birrer, MJ, Calinawan, A, Ceccarelli, M, Jaehnig, EJ, Jewell, SD. Precision proteogenomics reveals pan-cancer impact of germline variants. Cell 188(9):2312-2335.e26, 2025. e-Pub 2025. PMID: 40233739.
4. Savage, SR, Wang, Y, Chen, L, Jewell, SD, Newton, CJ, Dou, Y, Li, QK, Bathe, OF, Robles, AI, Omenn, GS, Thiagarajan, M, Zhang, H, Hostetter, G, Zhang, B. Frozen tissue coring and layered histological analysis improves cell type-specific proteogenomic characterization of pancreatic adenocarcinoma. Clin Proteomics 21(1):7, 2024. e-Pub 2024. PMID: 38291365.
5. Skerget, S, Penaherrera, D, Chari, A, Jagannath, S, Siegel, D, Vij, R, Orloff, GJ, Jakubowiak, AJ, Niesvizky, R, Liles, DK, Berdeja, JG, Levy, MY, Wolf, J, Usmani, S, Steis, RG, Srinivas, S, Roy, V, Rodríguez, P, Oriol, A, Kumar, SK, Krsnik, I, Matkiwsky, M, Girnius, SK, Conde, M, Chandra, S, Anderson, R, Solomon, W, Richards, DA, Patel, D, Menter, AR, Kaya, H, Hsu, G, Hassoun, H, Bargay, J, Anderson, L, Abella, E, Yalamachili, M, Wachsman, W, Volterra, F, Onitilo, AA, Min, F, Shieh, M, Bar, MH, Ngaiza, J, Harris, W, Sebag, M, Robles, R, Yost, KJ, Grossbard, M, Jewell, SD. Comprehensive molecular profiling of multiple myeloma identifies refined copy number and expression subtypes. Nat Genet 56(9):1878-1889, 2024. e-Pub 2024. PMID: 39160255.
6. Li, GX, Chen, L, Hsiao, Y, Mannan, R, Zhang, Y, Luo, J, Petralia, F, Cho, H, Hosseini, N, da Veiga Leprevost, F, Calinawan, A, Li, Y, Anand, S, Dagar, A, Geffen, Y, Kumar-Sinha, C, Chugh, S, Le, A, Ponce, S, Guo, S, Zhang, C, Schnaubelt, M, Al Deen, NN, Chen, F, Caravan, W, Houston, A, Hopkins, AC, Newton, CJ, Wang, XM, Polasky, DA, Haynes, S, Yu, F, Jing, X, Chen, S, Robles, AI, Mesri, M, Thiagarajan, M, An, E, Getz, G, Linehan, WM, Hostetter, G, Jewell, SD, Chan, DW, Wang, P, Omenn, GS, Mehra, R, Ricketts, CJ, Ding, L, Chinnaiyan, AM, Lazar, A. Comprehensive proteogenomic characterization of rare kidney tumors. Cell Rep Med 5(5), 2024. e-Pub 2024. PMID: 38703764.
7. Wu, Y, Terekhanova, NV, Caravan, W, Naser Al Deen, N, Lal, P, Chen, S, Mo, CK, Cao, S, Li, Y, Karpova, A, Liu, R, Zhao, Y, Shinkle, A, Strunilin, I, Weimholt, C, Sato, K, Yao, L, Serasanambati, M, Yang, X, Wyczalkowski, MA, Zhu, H, Zhou, DC, Jayasinghe, RG, Mendez, D, Wendl, MC, Clark, DJ, Newton, CJ, Ruan, Y, Reimers, MA, Pachynski, RK, Kinsinger, C, Jewell, SD, Chan, DW, Zhang, H, Chaudhuri, AA, Chheda, MG, Humphreys, BD, Mesri, M, Rodriguez, H, Hsieh, JJ, Ding, L, Chen, F. Epigenetic and transcriptomic characterization reveals progression markers and essential pathways in clear cell renal cell carcinoma. Nat Commun 14(1):1681, 2023. e-Pub 2023. PMID: 36973268.
8. Wang JM, Hong R, Demicco EG, Tan J, Lazcano R, Moreira AL, Li Y, Calinawan A, Razavian N, Schraink T, Gillette MA, Omenn GS, An E, Rodriguez H, Tsirigos A, Ruggles KV, Ding L, Robles AI, Mani DR, Rodland KD, Lazar AJ, Liu W, Fenyö D, Aguet F, Akiyama Y, Anand S, Anurag M, Babur Ö, Bavarva J, Birger C, Birrer MJ, Cantley LC, Cao S, Carr SA, Ceccarelli M, Chan DW, Chinnaiyan AM, Cho H, Chowdhury S, Cieslik MP, Clauser KR, Colaprico A, Zhou DC, Veiga Leprevost FD, Day C, Dhanasekaran SM, Domagalski MJ, Dou Y, Druker BJ, Edwards N, Ellis MJ, Selvan ME, Foltz SM, Francis A, Geffen Y, Getz G, Gonzalez Robles TJ, Gosline SJ, Gümüş ZH, Heiman DI, Hiltke T, Hostetter G, Hu Y, Huang C, Huntsman E, Iavarone A, Jaehnig EJ, Jewell SD, Ji J, Jiang W, Johnson JL, Katsnelson L, Ketchum KA, Kolodziejczak I, Krug K, Kumar-Sinha C, Lei JT, Liang W, Liao Y, Lindgren CM, Liu T, Ma W, Rodrigues FM, McKerrow W, Mesri M, Nesvizhskii AI, Newton CJ, Oldroyd R, Paulovich AG, Payne SH, Petralia F, Pugliese P, Reva B, Rykunov D, Satpathy S, Savage SR, Schadt EE, Schnaubelt M, Schürer S, Shi Z, Smith RD, Song X, Song Y, Stathias V, Storrs EP, Terekhanova NV, Thangudu RR, Thiagarajan M, Tignor N, Wang L, Wang P, Wang Y, Wen B, Wiznerowicz M, Wu Y, Wyczalkowski MA, Yao L, Yaron TM, Yi X, Zhang B, Zhang H, Zhang Q, Zhang X, Zhang Z. Deep learning integrates histopathology and proteogenomics at a pan-cancer level. Cell Rep Med 4(9), 2023. e-Pub 2023. PMID: 37582371.
9. Liang, WW, Lu, RH, Jayasinghe, RG, Foltz, SM, Porta-Pardo, E, Geffen, Y, Wendl, MC, Segura Lazcano, R, Kołodziejczak, I, Song, Y, Govindan, A, Demicco, EG, Li, X, Li, Y, Sethuraman, S, Payne, SH, Fenyö, D, Rodriguez, H, Wiznerowicz, M, Shen, H, Mani, DR, Rodland, KD, Lazar, A, Robles, AI, Ding, L, Aguet, F, Akiyama, Y, An, E, Anand, S, Anurag, M, Babur, Ö, Bavarva, J, Birger, C, Birrer, MJ, Calinawan, A, Cantley, LC, Cao, S, Carr, SA, Ceccarelli, M, Chan, D, Chinnaiyan, AM, Cho, H, Chowdhury, S, Cieślik, M, Clauser, KR, Colaprico, A, Zhou, DC, da Veiga Leprevost, F, Jaehnig, EJ, Jewell, SD. Integrative multi-omic cancer profiling reveals DNA methylation patterns associated with therapeutic vulnerability and cell-of-origin. Cancer cell 41(9):1567-1585.e7, 2023. e-Pub 2023. PMID: 37582362.
10. Dou, Y, Katsnelson, L, Gritsenko, MA, Hu, Y, Reva, B, Hong, R, Wang, YT, Kołodziejczak, I, Lu, RH, Tsai, CF, Bu, W, Liu, W, Guo, X, An, E, Arend, RC, Bavarva, J, Chen, L, Chu, RK, Czekański, A, Davoli, T, Demicco, EG, Delair, D, Devereaux, K, Dhanasekaran, SM, Dottino, P, Dover, B, Fillmore, TL, Foxall, M, Hermann, CE, Hiltke, T, Hostetter, G, Jędryka, M, Jewell, SD, Johnson, I, Kahn, AG, Ku, AT, Kumar-Sinha, C, Kurzawa, P, Lazar, A, Segura Lazcano, R, Lei, JT, Li, Y, Liao, Y, Lih, TM, Lin, TT, Martignetti, JA, Masand, RP, Matkowski, R, McKerrow, W, Mesri, M, Clinical Proteomic Tumor Analysis Consortium. Proteogenomic insights suggest druggable pathways in endometrial carcinoma. Cancer cell 41(9):1586-1605.e15, 2023. e-Pub 2023. PMID: 37567170.
11. Geffen, Y, Anand, S, Akiyama, Y, Yaron, TM, Song, Y, Johnson, JL, Govindan, A, Babur, Ö, Li, Y, Huntsman, E, Wang, LB, Birger, C, Heiman, DI, Zhang, Q, Miller, M, Maruvka, Y, Haradhvala, NJ, Calinawan, A, Belkin, S, Kerelsky, A, Clauser, KR, Krug, K, Satpathy, S, Payne, SH, Mani, DR, Gillette, MA, Dhanasekaran, SM, Thiagarajan, M, Mesri, M, Rodriguez, H, Robles, AI, Carr, SA, Lazar, A, Aguet, F, Cantley, LC, Ding, L, Getz, G, An, E, Anurag, M, Bavarva, J, Birrer, MJ, Cao, S, Ceccarelli, M, Chan, DW, Chinnaiyan, AM, Cho, H, Chowdhury, S, Cieślik, M, Jaehnig, EJ, Jewell, SD. Pan-cancer analysis of post-translational modifications reveals shared patterns of protein regulation. Cell 186(18):3945-3967.e26, 2023. e-Pub 2023. PMID: 37582358.
12. Li, Y, Porta-Pardo, E, Tokheim, C, Bailey, MH, Yaron, TM, Stathias, V, Geffen, Y, Imbach, KJ, Cao, S, Anand, S, Akiyama, Y, Liu, W, Wyczalkowski, MA, Song, Y, Storrs, E, Wendl, MC, Zhang, W, Sibai, M, Ruiz-Serra, V, Liang, WW, Terekhanova, NV, Rodrigues, FM, Clauser, KR, Heiman, DI, Zhang, Q, Aguet, F, Calinawan, A, Dhanasekaran, SM, Birger, C, Satpathy, S, Zhou, DC, Wang, LB, Baral, J, Johnson, JL, Huntsman, E, Pugliese, P, Colaprico, A, Iavarone, A, Chheda, MG, Ricketts, CJ, Fenyö, D, Payne, SH, Rodriguez, H, Robles, AI, Gillette, MA, Kumar-Sinha, C, Lazar, A, Cantley, LC, Jaehnig, EJ, Jewell, SD. Pan-cancer proteogenomics connects oncogenic drivers to functional states. Cell 186(18):3921-3944.e25, 2023. e-Pub 2023. PMID: 37582357.
13. Li, Y, Lih, TM, Dhanasekaran, SM, Mannan, R, Chen, L, Cieślik, M, Wu, Y, Lu, RH, Clark, DJ, Kołodziejczak, I, Hong, R, Chen, S, Zhao, Y, Chugh, S, Caravan, W, Naser Al Deen, N, Hosseini, N, Newton, CJ, Krug, K, Xu, Y, Cho, KC, Hu, Y, Zhang, Y, Kumar-Sinha, C, Ma, W, Calinawan, A, Wyczalkowski, MA, Wendl, MC, Wang, Y, Guo, S, Zhang, C, Le, A, Dagar, A, Hopkins, AC, Cho, H, da Veiga Leprevost, F, Jing, X, Teo, GC, Liu, W, Reimers, MA, Pachynski, RK, Lazar, A, Chinnaiyan, AM, Van Tine, BA, Zhang, B, Rodland, KD, Getz, G, Mani, DR, Wang, P, Jewell, SD, Omenn GS, Mehra R, Wiznerowicz M, Robles AI, Mesri M, Hiltke T, An E, Rodriguez H, Chan DW, Ricketts CJ, Nesvizhskii AI, Zhang H, Ding L, Clinical Proteomic Tumor Analysis Consortium. Histopathologic and proteogenomic heterogeneity reveals features of clear cell renal cell carcinoma aggressiveness. Cancer cell 41(1):139-163.e17, 2023. e-Pub 2023. PMID: 36563681.
14. Li, QK, Hu, Y, Chen, L, Schnaubelt, M, Cui Zhou, D, Li, Y, Lu, RH, Thiagarajan, M, Hostetter, G, Newton, CJ, Jewell, SD, Omenn, GS, Robles, AI, Mesri, M, Bathe, OF, Zhang, B, Ding, L, Hruban, RH, Chan, DW, Zhang, H. Neoplastic cell enrichment of tumor tissues using coring and laser microdissection for proteomic and genomic analyses of pancreatic ductal adenocarcinoma. Clin Proteomics 19(1), 2022. e-Pub 2022. PMID: 36266629.
15. Cao L, Huang C, Cui Zhou D, Hu Y, Lih TM, Savage SR, Krug K, Clark DJ, Schnaubelt M, Chen L, da Veiga Leprevost F, Eguez RV, Yang W, Pan J, Wen B, Dou Y, Jiang W, Liao Y, Shi Z, Terekhanova NV, Cao S, Lu RJ, Li Y, Liu R, Zhu H, Ronning P, Wu Y, Wyczalkowski MA, Easwaran H, Danilova L, Mer AS, Yoo S, Wang JM, Liu W, Haibe-Kains B, Thiagarajan M, Jewell SD, Hostetter G, Newton CJ, Li QK, Roehrl MH, Fenyo D, Wang P, Nesvizhskii AI, Mani DR, Omenn GS, Boja ES, Mesri M, Robles AI, Rodriguez H, Bathe OF, Chan DW, Hruban RH, Ding L, Zhang B, Zhang H, Clinical Proteomic Tumor Analysis Consortium. Proteogenomic characterization of pancreatic ductal adenocarcinoma. Cell 184(19):5031-5052.e26, 2021. e-Pub 2021. PMID: 34534465.
16. Satpathy S, Krug K, Jean Beltran PM, Savage SR, Petralia F, Kumar-Sinha C, Dou Y, Reva B, Kane MH, Avanessian SC, Vasaikar SV, Krek A, Lei JT, Jaehnig EJ, Omelchenko T, Geffen Y, Bergstrom EJ, Stathias V, Christianson KE, Heiman DI, Cieslik MP, Cao S, Song X, Ji J, Liu W, Li K, Wen B, Li Y, Gumus ZH, Selvan ME, Soundararajan R, Visal TH, Raso MG, Parra ER, Babur O, Vats P, Anand S, Schraink T, Cornwell M, Rodrigues FM, Zhu H, Mo CK, Zhang Y, da Veiga Leprevost F, Huang C, Chinnaiyan AM, Wyczalkowski MA, Omenn GS, Newton CJ, Schurer S, Ruggles KV, Fenyo D, Jewell SD, Thiagarajan M, Mesri M, Rodriguez H, Mani SA, Udeshi ND, Getz G, Suh J, Li QK, Hostetter G, Paik PK, Dhanasekaran SM, Govindan R, Ding L, Robles AI, Clauser KR, Nesvizhskii AI, Wang P, Carr SA, Zhang B, Mani DR, Gillette MA. A proteogenomic portrait of lung squamous cell carcinoma. Cell 184(16):4348-4371.e40, 2021. e-Pub 2021. PMID: 34358469.
17. de Goede OM, Nachun DC, Ferraro NM, Gloudemans MJ, Rao AS, Smail C, Eulalio TY, Aguet F, Ng B, Xu J, Barbeira AN, Castel SE, Kim-Hellmuth S, Park Y, Scott AJ, Strober BJ, Anand S, Gabriel S, Getz GA, Graubert A, Hadley K, Handsaker RE, Huang KH, Li X, MacArthur DG, Meier SR, Nedzel JL, Nguyen DT, Segrè AV, Todres E, Balliu B, Bonazzola R, Brown A, Conrad DF, Cotter DJ, Cox N, Das S, Dermitzakis ET, Einson J, Engelhardt BE, Eskin E, Flynn ED, Fresard L, Gamazon ER, Garrido-Martín D, Gay NR, Guigó R, Hamel AR, He Y, Hoffman PJ, Hormozdiari F, Hou L, Jo B, Kasela S, Kashin S, Kellis M, Kwong A, Li X, Liang Y, Mangul S, Mohammadi P, Muñoz-Aguirre M, Nobel AB, Oliva M, Park Y, Parsana P, Reverter F, Rouhana JM, Sabatti C, Saha A, Stephens M, Stranger BE, Teran NA, Viñuela A, Wang G, Wright F, Wucher V, Zou Y, Ferreira PG, Li G, Melé M, Yeger-Lotem E, Bradbury D, Krubit T, McLean JA, Qi L, Robinson K, Roche NV, Smith AM, Tabor DE, Undale A, Bridge J, Brigham LE, Foster BA, Gillard BM, Hasz R, Hunter M, Johns C, Johnson M, Karasik E, Kopen G, Leinweber WF, McDonald A, Moser MT, Myer K, Ramsey KD, Roe B, Shad S, Thomas JA, Walters G, Washington M, Wheeler J, Jewell SD, Rohrer DC, Valley DR, Davis DA, Mash DC, Barcus ME, Branton PA, Sobin L, Barker LK, Gardiner HM, Mosavel M, Siminoff LA, Flicek P, Haeussler M, Juettemann T, Kent W, Lee CM, Powell CC, Rosenbloom KR, Ruffier M, Sheppard D, Taylor K, Trevanion SJ, Zerbino DR, Abell NS, Akey J, Chen L, Demanelis K, Doherty JA, Feinberg AP, Hansen KD, Hickey PF, Jasmine F, Jiang L, Kaul R, Kibriya MG, Li JB, Li Q, Lin S, Linder SE, Pierce BL, Rizzardi LF, Skol AD, Smith KS, Snyder M, Stamatoyannopoulos J, Tang H, Wang M, Carithers LJ, Guan P, Koester SE, Little A, Moore HM, Nierras CR, Rao AK, Vaught JB, Volpi S, Brown CD, Wen X, Hall IM, Battle A, Lappalainen T, Im HK, Ardlie KG, Mostafavi S, Quertermous T, Kirkegaard K, Montgomery SB, GTEx Consortium. Population-scale tissue transcriptomics maps long non-coding RNAs to complex disease. Cell 184(10):2633-2648.e19, 2021. e-Pub 2021. PMID: 33864768.
18. Bagchi A, Madaj Z, Engel KB, Guan P, Rohrer DC, Valley DR, Wolfrum E, Feenstra K, Roche N, Hostetter G, Moore HM, Jewell SD. Impact of Preanalytical Factors on the Measurement of Tumor Tissue Biomarkers Using Immunohistochemistry. J Histochem Cytochem 69(5):297-320, 2021. e-Pub 2021. PMID: 33641490.
19. Huang C, Chen L, Savage SR, Eguez RV, Dou Y, Li Y, da Veiga Leprevost F, Jaehnig EJ, Lei JT, Wen B, Schnaubelt M, Krug K, Song X, Cieslik M, Chang HY, Wyczalkowski MA, Li K, Colaprico A, Li QK, Clark DJ, Hu Y, Cao L, Pan J, Wang Y, Cho KC, Shi Z, Liao Y, Jiang W, Anurag M, Ji J, Yoo S, Zhou DC, Liang WW, Wendl M, Vats P, Carr SA, Mani DR, Zhang Z, Qian J, Chen XS, Pico AR, Wang P, Chinnaiyan AM, Ketchum KA, Kinsinger CR, Robles AI, An E, Hiltke T, Mesri M, Thiagarajan M, Weaver AM, Sikora AG, Lubinski J, Wierzbicka M, Wiznerowicz M, Satpathy S, Gillette MA, Miles G, Ellis MJ, Omenn GS, Rodriguez H, Boja ES, Dhanasekaran SM, Ding L, Nesvizhskii AI, El-Naggar AK, Chan DW, Zhang H, Zhang B, Agarwal A, Anderson ML, Avanessian SC, Avtonomov D, Bathe OF, Birger C, Birrer MJ, Blumenberg L, Bocik WE, Borate U, Borucki M, Burke MC, Cai S, Calinawan AP, Cerda S, Charamut A, Chen LS, Chowdhury S, Clauser KR, Culpepper H, Czernicki T, D'Angelo F, Day J, Young SD, Demir E, Ding F, Domagalski MJ, Dort JC, Druker B, Duffy E, Dyer M, Edwards NJ, Elburn K, Ermakova TS, Fenyo D, Ferrarotto R, Francis A, Gabriel S, Garofano L, Geffen Y, Getz G, Goldthwaite CA, Hannick LI, Hariharan P, Hayes DN, Heiman D, Hindenach B, Hoadley KA, Hostetter G, Hyrcza M, Jewell SD, Jones CD, Kane M, Karz A, Kothadia RB, Krek A, Kumar-Sinha C, Liu T, Liu H, Ma W, Malc E, Malovannaya A, Mareedu S, Markey SP, Marrero-Oliveras A, Maunganidze N, McDermott JE, McGarvey PB, McGee J, Mieczkowski P, Migliozzi S, Montgomery R, Newton CJ, Ozbek U, Paulovich AG, Payne SH, Pazardzhikliev DD, Perou AM, Petralia F, Petrenko L, Piehowski PD, Placantonakis D, Polonskaya L, Ponomareva EV, Potapova O, Qi L, Qu N, Ramkissoon S, Reva B, Richey S, Robinson K, Roche N, Rodland K, Rohrer DC, Rykunov D, Schadt EE, Shi Y, Shutack Y, Singh S, Skelly T, Smith R, Sokoll LJ, Stawicki J, Stein SE, Suh J, Szopa W, Tabor D, Tan D, Tansil D, Teo GC, Thangudu RR, Tognon C, Traer E, Tsang S, Tyner J, Um KS, Valley DR, Vasilev LV, Vatanian N, Velvulou U, Vernon M, Westbrook TF, Whiteaker JR, Wu Y, Xu M, Yao L, Yi X, Yu F, Zaalishvili K, Zakhartsev Y, Zelt R, Zhao G, Zhu J, Clinical Proteomic Tumor Analysis Consortium. Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma. Cancer Cell 39(3):361-379.e16, 2021. e-Pub 2021. PMID: 33417831.
20. Wang L, Karpova A, Gritsenko MA, Kyle JE, Cao S, Li Y, Rykunov D, Colaprico A, Rothstein JH, Hong R, Stathias V, Cornwell M, Petralia F, Wu Y, Reva B, Krug K, Pugliese P, Kawaler E, Olsen LK, Liang W, Song X, Dou Y, Wendl MC, Caravan W, Liu W, Zhou DC, Ji J, Tsai C, Petyuk VA, Moon J, Ma W, Chu RK, Weitz KK, Moore RJ, Monroe ME, Zhao R, Yang X, Yoo S, Krek A, Demopoulos A, Zhu H, Wyczalkowski MA, McMichael JF, Henderson BL, Lindgren CM, Boekweg H, Lu S, Baral J, Yao L, Stratton KG, Bramer LM, Zink E, Couvillion SP, Bloodsworth KJ, Satpathy S, Sieh W, Boca SM, Schürer S, Chen F, Wiznerowicz M, Ketchum KA, Boja ES, Kinsinger CR, Robles AI, Hiltke T, Thiagarajan M, Nesvizhskii AI, Zhang B, Mani DR, Ceccarelli M, Chen XS, Cottingham SL, Li QK, Kim AH, Fenyö D, Ruggles KV, Rodriguez H, Mesri M, Payne SH, Resnick AC, Wang P, Smith RD, Iavarone A, Chheda MG, Barnholtz-Sloan JS, Rodland KD, Liu T, Ding L, Agarwal A, Amin M, An E, Anderson ML, Andrews DW, Bauer T, Birger C, Birrer MJ, Blumenberg L, Bocik WE, Borate U, Borucki M, Burke MC, Cai S, Calinawan AP, Carr SA, Cerda S, Chan DW, Charamut A, Chen LS, Chesla D, Chinnaiyan AM, Chowdhury S, Cieślik MP, Clark DJ, Culpepper H, Czernicki T, D'Angelo F, Day J, Young SD, Demir E, Dhanasekaran SM, Dhir R, Domagalski MJ, Druker B, Duffy E, Dyer M, Edwards NJ, Edwards R, Elburn K, Ellis MJ, Eschbacher J, Francis A, Gabriel S, Gabrovski N, Garofano L, Getz G, Gillette MA, Godwin AK, Golbin D, Hanhan Z, Hannick LI, Hariharan P, Hindenach B, Hoadley KA, Hostetter G, Huang C, Jaehnig E, Jewell SD, Ji N, Jones CD, Karz A, Kaspera W, Kim L, Kothadia RB, Kumar-Sinha C, Lei J, Leprevost FD, Li K, Liao Y, Lilly J, Liu H, Lubínski J, Madan R, Maggio W, Malc E, Malovannaya A, Mareedu S, Markey SP, Marrero-Oliveras A, Martinez N, Maunganidze N, McDermott JE, McGarvey PB, McGee J, Mieczkowski P, Migliozzi S, Modugno F, Montgomery R, Newton CJ, Omenn GS, Ozbek U, Paklina OV, Paulovich AG, Perou AM, Pico AR, Piehowski PD, Placantonakis DG, Polonskaya L, Potapova O, Pruetz B, Qi L, Ramkissoon S, Resnick A, Richey S, Riggins G, Robinson K, Roche N, Rohrer DC, Rood BR, Rossell L, Savage SR, Schadt EE, Shi Y, Shi Z, Shutack Y, Singh S, Skelly T, Sokoll LJ, Stawicki J, Stein SE, Suh J, Szopa W, Tabor D, Tan D, Tansil D, Thangudu RR, Tognon C, Traer E, Tsang S, Tyner J, Um KS, Valley DR, Vasaikar S, Vatanian N, Velvulou U, Vernon M, Wan W, Wang J, Webster A, Wen B, Whiteaker JR, Wilson GD, Zakhartsev Y, Zelt R, Zhang H, Zhang L, Zhang Z, Zhao G, Zhu J. Proteogenomic and metabolomic characterization of human glioblastoma. Cancer Cell 39(4):509-528, 2021. e-Pub 2021. PMID: 33577785.
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47. Fagundes CP, Glaser R, Johnson SL, Andridge RR, Yang EV, Di Gregorio MP, Chen M, Lambert DR, Jewell SD, Bechtel MA, Hearne DW, Herron JB, Kiecolt-Glaser JK. Basal cell carcinoma: stressful life events and the tumor environment. Arch Gen Psychiatry 69(6):618-26, 2012. e-Pub 2012. PMID: 22664550.
48. Jewell SD. Perspective on Biorepository Return of Results and Incidental Findings. Min JL SCI & TECH 13(2), 2012. e-Pub 2012.
49. Edelman MJ, Hodgson L, Wang X, Christenson R, Jewell S, Vokes E, Kratzke R. Serum vascular endothelial growth factor and COX-2/5-LOX inhibition in advanced non-small cell lung cancer: Cancer and Leukemia Group B 150304. J Thorac Oncol 6(11):1902-6, 2011. e-Pub 2011. PMID: 21964530.
50. Glaser R, Andridge R, Yang EV, Shana'ah AY, Di Gregorio M, Chen M, Johnson SL, De Renne LA, Lambert DR, Jewell SD, Bechtel MA, Hearne DW, Herron JB, Kiecolt-Glaser JK. Tumor site immune markers associated with risk for subsequent basal cell carcinomas. PLoS One 6(9):e25160, 2011. e-Pub 2011. PMID: 21980389.
51. Moore HM, Kelly AB, Jewell SD, McShane LM, Clark DP, Greenspan R, Hayes DF, Hainaut P, Kim P, Mansfield EA, Potapova O, Riegman P, Rubinstein Y, Seijo E, Somiari S, Watson P, Weier HU, Zhu C, Vaught J. Biospecimen reporting for improved study quality (BRISQ). Cancer Cytopathol 119(2):92-101, 2011. e-Pub 2011. PMID: 21433001.
52. Moore HM, Kelly AB, Jewell SD, McShane LM, Clark DP, Greenspan R, Hayes DF, Hainaut P, Kim P, Mansfield E, Potapova O, Riegman P, Rubinstein Y, Seijo E, Somiari S, Watson P, Weier HU, Zhu C, Vaught J. Biospecimen reporting for improved study quality (BRISQ). J Proteome Res 10(8):3429-38, 2011. e-Pub 2011. PMID: 21574648.
53. Rimm DL, Nielsen TO, Jewell SD, Rohrer DC, Broadwater G, Waldman F, Mitchell KA, Singh B, Tsongalis GJ, Frankel WL, Magliocco AM, Lara JF, Hsi ED, Bleiweiss IJ, Badve SS, Chen B, Ravdin PM, Schilsky RL, Thor A, Berry DA. Cancer and Leukemia Group B Pathology Committee guidelines for tissue microarray construction representing multicenter prospective clinical trial tissues. J Clin Oncol 29(16):2282-90, 2011. e-Pub 2011. PMID: 21519016.
54. Moore HM, Kelly A, Jewell SD, McShane LM, Clark DP, Greenspan R, Hainaut P, Hayes DF, Kim P, Mansfield E, Potapova O, Riegman P, Rubinstein Y, Seijo E, Somiari S, Watson P, Weier HU, Zhu C, Vaught J. Biospecimen Reporting for Improved Study Quality. Biopreserv Biobank 9(1):57-70, 2011. e-Pub 2011. PMID: 21826252.
55. Hait WN, Khleif SN, Doroshow JH, Gutman SI, Barker PE, Dracopoli NC, Gutierrez A, Skates SJ, Austin MJ, Bast RC, Becker RL, Berry DA, Bradley LA, Bross PF, Chang M, Clark AM, Devanarayan V, Dressler LG, Endres DB, Enns RK, Frullo FJ, Harper CC, Hayes DF, Hinestrosa M, Hinman L, Hruszkewycz A, Huang PS, Jessup J, Juweid ME, Kalush F, Kaul KL, Kelloff G, Klee GG, Koch WH, Lemery S, Levy JB, Mansfield E, Maurey KM, Moseley GB, Naples R, Omel JP, Orr MS, Pennello GA, Pignato WJ, Ransohoff DF, Reid LH, Rodriguez H, Schilsky RL, Schueren R, Simon RM, Sluss PM, Sninsky JJ, Srivastava S, Taube SE, Taylor JM, van't Veer LJ, Vishnuvajjala L, Wang S, Warrington JA, Watson MS, Weiner RS, Yost J, Rajagopal G, Buetow KH, Tong W, Tucker-Kellogg G, Beck J, Bryant BM, Crichton D, Kim P, McIntosh MW, O'Leary T, Orr MS, Saltz JH, Shih WJ, Siemers N, Speakman J, Spears P, Srivastava S, Stancampiano BA, Zhang Z, Zujewski J, Compton C, Holloway B, Jewell SD, Mansfield E, Blanchard KL, Cosentino L, David KA, Mars MD, Dressler LG, Fore IM, Goldman P, Hammond EH, Hegele RG, Juhl HH, Lubensky IA, Miller GA, Mullaney BP, Philip R, Qualman SJ, Rohlfs EM, Sobel ME, Stern HM, Thompson EA, Demetri GD, Dhingra K, Kelloff GJ, Pazdur R, Adelman MJ, Alexander J, Barrett J, Chang DD, Engel JM, Geoghegan C, Grayzel DS, Grochow LB, Johnston J, Kenkare-Mitra S, Pensak D, Spinella DG, Woollett GR. AACR-FDA-NCI Cancer Biomarkers Collaborative consensus report: advancing the use of biomarkers in cancer drug development. Clin Cancer Res 16(13):3299-318, 2010. e-Pub 2010. PMID: 20501613.
56. Bertagnolli MM, Warren RS, Niedzwiecki D, Mueller E, Compton CC, Redston M, Hall M, Hahn HP, Jewell SD, Mayer RJ, Goldberg RM, Saltz LB, Loda M. p27Kip1 in stage III colon cancer: implications for outcome following adjuvant chemotherapy in cancer and leukemia group B protocol 89803. Clin Cancer Res 15(6):2116-22, 2009. e-Pub 2009. PMID: 19276255.
57. Bertagnolli MM, Niedzwiecki D, Compton CC, Hahn HP, Hall M, Damas B, Jewell SD, Mayer RJ, Goldberg RM, Saltz LB, Warren RS, Redston M. Microsatellite instability predicts improved response to adjuvant therapy with irinotecan, fluorouracil, and leucovorin in stage III colon cancer: Cancer and Leukemia Group B Protocol 89803. J Clin Oncol 27(11):1814-21, 2009. e-Pub 2009. PMID: 19273709.
58. Leyland-Jones BR, Ambrosone CB, Bartlett J, Ellis MJ, Enos RA, Raji A, Pins MR, Zujewski JA, Hewitt SM, Forbes JF, Abramovitz M, Braga S, Cardoso F, Harbeck N, Denkert C, Jewell SD. Recommendations for collection and handling of specimens from group breast cancer clinical trials. J Clin Oncol 26(34):5638-44, 2008. e-Pub 2008. PMID: 18955459.
59. Szafranska AE, Davison TS, Shingara J, Doleshal M, Riggenbach JA, Morrison CD, Jewell S, Labourier E. Accurate molecular characterization of formalin-fixed, paraffin-embedded tissues by microRNA expression profiling. J Mol Diagn 10(5):415-23, 2008. e-Pub 2008. PMID: 18687792.
60. Edelman MJ, Watson D, Wang X, Morrison C, Kratzke RA, Jewell S, Hodgson L, Mauer AM, Gajra A, Masters GA, Bedor M, Vokes EE, Green MJ. Eicosanoid Modulation in Advanced Lung Cancer: Cyclooxygenase-2 Expression Is a Positive Predictive Factor for Celecoxib + Chemotherapy—Cancer and Leukemia Group B Trial 30203. J Clin Oncol 26(6):848-55, 2008. e-Pub 2008. PMID: 18281656.
61. Yang EV, Sood AK, Chen M, Li Y, Eubank TD, Marsh CB, Jewell S, Flavahan NA, Morrison C, Yeh PE, Lemeshow S, Glaser R. Norepinephrine up-regulates the expression of vascular endothelial growth factor, matrix metalloproteinase (MMP)-2, and MMP-9 in nasopharyngeal carcinoma tumor cells. Cancer Res 66(21):10357-64, 2006. e-Pub 2006. PMID: 17079456.
62. Cook CH, Zhang Y, Sedmak DD, Martin LC, Jewell S, Ferguson RM. Pulmonary cytomegalovirus reactivation causes pathology in immunocompetent mice. Crit Care Med 34(3):842-9, 2006. e-Pub 2006. PMID: 16521279.
63. Redston M, Compton CC, Miedema BW, Niedzwiecki D, Dowell JM, Jewell SD, Fleshman JM, Bem J, Mayer RJ, Bertagnolli MM. Analysis of micrometastatic disease in sentinel lymph nodes from resectable colon cancer: results of Cancer and Leukemia Group B Trial 80001. J Clin Oncol 24(6):878-83, 2006. e-Pub 2006. PMID: 16418493.
64. Saul AN, Oberyszyn TM, Daugherty C, Kusewitt D, Jones S, Jewell S, Malarkey WB, Lehman A, Lemeshow S, Dhabhar FS. Chronic stress and susceptibility to skin cancer. J Natl Cancer Inst 97(23):1760-7, 2005. e-Pub 2005. PMID: 16333031.
65. Jewell SD, Monovich LC, Edgerton S, Schilsky RL, Dressler LG. Biospecimen Banking, Standardization, and Lessons Learned from the Cancer and Leukemia Group B Pathology Coordinating Office. Semin Breast Dis 8(2):93-99, 2005. e-Pub 2005.
66. Chen M, Deng A, Crowson AN, Srinivasan M, Yearsley KH, Jewell S, Morrison C, Long S, Werling R, Magro C. Assessment of T-cell clonality via T-cell receptor-gamma rearrangements in cutaneous T-cell-dominant infiltrates using polymerase chain reaction and single-stranded DNA conformational polymorphism assay. Appl Immunohistochem Mol Morphol 12(4):373-9, 2004. e-Pub 2004. PMID: 15536341.
67. Jewell SD, Srinivasan M, McCart LM, Williams N, Grizzle WH, LiVolsi V, MacLennan G, Sedmak DD. Analysis of the molecular quality of human tissues: an experience from the Cooperative Human Tissue Network. Am J Clin Pathol 118(5):733-41, 2002. e-Pub 2002. PMID: 12428794.
68. Srinivasan M, Gienapp IE, Stuckman SS, Rogers CJ, Jewell SD, Kaumaya PT, Whitacre CC. Suppression of experimental autoimmune encephalomyelitis using peptide mimics of CD28. J Immunol 169(4):2180-8, 2002. e-Pub 2002. PMID: 12165548.
69. Schilsky RL, Dressler LM, Bucci D, Monovich L, Jewell S, Suster S, Caligiuri MA, Kantoff PW, Compton C. Cooperative group tissue banks as research resources: the cancer and leukemia group B tissue repositories. Clin Cancer Res 8(5):943-8, 2002. e-Pub 2002. PMID: 12006505.
70. Srinivasan M, Jewell SD. Evaluation of TGF-alpha and EGFR expression in oral leukoplakia and oral submucous fibrosis by quantitative immunohistochemistry. Oncology 61(4):284-92, 2001. e-Pub 2001. PMID: 11721175.
71. Srinivasan M, Jewell SD. Quantitative estimation of PCNA, c-myc, EGFR and TGF-α in oral submucous fibrosis — an immunohistochemical study. Oral Oncol 37(5):461-7, 2001. e-Pub 2001. PMID: 11377235.
72. Comas TC, Tai T, Kimmel D, Scheithauer BW, Burger PC, Pearl DK, Jewell SD, Yates AJ. Immunohistochemical staining for ganglioside GD1b as a diagnostic and prognostic marker for primary human brain tumors. Neuro Oncol 1(4):261-7, 1999. e-Pub 1999. PMID: 11550317.
73. Jewell SD, Gienapp IE, Cox KL, Whitacre CC. Oral tolerance as therapy for experimental autoimmune encephalomyelitis and multiple sclerosis: demonstration of T cell anergy. Immunol Cell Biol 76(1):74-82, 1998. e-Pub 1998. PMID: 9553779.
74. Kannan R, Bijur GN, Mallery SR, Beck FM, Sabourin CL, Jewell SD, Schuller DE, Stoner GD. Transforming growth factor-alpha overexpression in proliferative verrucous leukoplakia and oral squamous cell carcinoma: an immunohistochemical study. Oral Surg Oral Med Oral Pathol Oral Radiol Endod 82(1):69-74, 1996. e-Pub 1996. PMID: 8843456.
75. Fox CC, Jewell SD, Whitacre CC. Rat peritoneal mast cells present antigen to a PPD-specific T cell line. Cell Immunol 158(1):253-64, 1994. e-Pub 1994. PMID: 7916267.
76. Whitacre CC, Gienapp IE, Cox K, Javed N, Meyer A, Jewell SD, Fuller K, Bitar D. Oral tolerance as a therapeutic approach to autoimmune disease. Mucosal Immunol 1:3-5, 1993. e-Pub 1993.
77. Whitacre C, Apseloff G, Cox K, Matkovic V, Jewell S, Gerber N. Suppression of experimental autoimmune encephalomyelitis by gallium nitrate. J Neuroimmunol 39(1-2):175-81, 1992. e-Pub 1992. PMID: 1377710.
78. Tuttle SE, Jewell SD, Mojzisik CM, Hinkle GH, Colcher D, Schlom J, Martin EW. Intraoperative radioimmunolocalization of colorectal carcinoma with a hand-held gamma probe and MAb B72.3: Comparison of in vivo gamma probe counts with in vitro MAb radiolocalization. Int J Cancer 42(3):352-8, 1988. e-Pub 1988. PMID: 3417363.
79. Oredipe OA, Barth RF, Tuttle SE, Adams DM, Sautins I, Bucci DM, Mojzisik CM, Hinkle GH, Jewell S, Steplewski Z, Thurston MO, Martin Jr EW. Limits of sensitivity for the radioimmunodetection of colon cancer by means of a hand held gamma probe. Int J Rad Appl Instrum B 15(6):595-603, 1988. e-Pub 1988. PMID: 3251894.
80. Goodwin RA, Tuttle SE, Bucci DM, Jewell SD, Martin EW, Steplewski Z. Tumor-associated antigen expression of primary and metastatic colon carcinomas detected by monoclonal antibody 17-1A. Am J Clin Pathol 88(4):462-7, 1987. e-Pub 1987. PMID: 3310608.

Review Articles

1. Li Y, Dou Y, Veiga Leprevost FD, Geffen Y, Calinawan AP, Aguet F, Akiyama Y, Anand S, Birger C, Cao S, Chaudhary R, Chilappagari P, Cieslik M, Colaprico A, Zhou DC, Day C, Domagalski MJ, Selvan ME, Fenyö D, Foltz SM, Francis A, Gonzalez-Robles T, Gümüş ZH, Heiman D, Holck M, Hong R, Hu Y, Jaehnig EJ, Ji J, Jiang W, Katsnelson L, Ketchum KA, Klein RJ, Lei JT, Liang W, Liao Y, Lindgren CM, Ma W, Ma L, MacCoss MJ, Rodrigues FM, McKerrow W, Nguyen N, Oldroyd R, Pilozzi A, Pugliese P, Reva B, Rudnick P, Ruggles KV, Rykunov D, Savage SR, Schnaubelt M, Schraink T, Shi Z, Singhal D, Song X, Storrs E, Terekhanova NV, Thangudu RR, Thiagarajan M, Wang L, Wang JM, Wang Y, Wen B, Wu Y, Wyczalkowski MA, Xin Y, Yao L, Yi X, Zhang H, Zhang Q, Zuhl M, Getz G, Ding L, Nesvizhskii AI, Wang P, Robles AI, Zhang B, Payne SH, Lazar AJ, Paulovich AG, Colaprico A, Iavarone A, Chinnaiyan AM, Druker BJ, Kumar-Sinha C, Newton CJ, Huang C, Mani DR, Smith RD, Huntsman E, Schadt EE, An E, Petralia F, Hostetter G, Omenn GS, Cho H, Rodriguez H, Zhang H, Kolodziejczak I, Johnson JL, Bavarva J, Tan J, Rodland KD, Clauser KR, Krug K, Cantley LC, Wiznerowicz M, Ellis MJ, Anurag M, Mesri M, Gillette MA, Birrer MJ, Ceccarelli M, Dhanasekaran SM, Edwards N, Tignor N, Babur Ö, Pugliese P, Gosline SJ, Jewell SD, Satpathy S, Chowdhury S, Schürer S, Carr SA, Liu T, Hiltke T, Yaron TM, Stathias V, Liu W, Zhang X, Song Y, Zhang Z, Chan DW, Clinical Proteomic Tumor Analysis Consortium. Proteogenomic data and resources for pan-cancer analysis. Cancer cell 41(8):1397-1406, 2023. e-Pub 2023. PMID: 37582339.
2. Srinivasan M, Sedmak D, Jewell S. Effect of fixatives and tissue processing on the content and integrity of nucleic acids. Am J Pathol 161(6):1961-71, 2002. e-Pub 2002. PMID: 12466110.

Other Articles

1. Skerget, S, Penaherrera, D, Chari, A, Jagannath, S, Siegel, D, Vij, R, Orloff, GJ, Jakubowiak, AJ, Niesvizky, R, Liles, DK, Berdeja, JG, Levy, MY, Wolf, J, Usmani, S, Steis, RG, Srinivas, S, Roy, V, Rodríguez, P, Oriol, A, Kumar, SK, Krsnik, I, Matkiwsky, M, Girnius, SK, Conde, M, Chandra, S, Anderson, R, Solomon, W, Richards, DA, Patel, D, Menter, AR, Kaya, H, Hsu, G, Hassoun, H, Bargay, J, Anderson, L, Abella, E, Yalamachili, M, Wachsman, W, Volterra, F, Onitilo, AA, Min, F, Shieh, M, Bar, MH, Ngaiza, J, Harris, W, Sebag, M, Robles, R, Yost, KJ, Grossbard, M, Jewell, SD Correction to. Nature Genetics 57(7):1789, 2025. PMID: 40490515.
2. Wu, Y, Terekhanova, NV, Caravan, W, Naser Al Deen, N, Lal, P, Chen, S, Mo, CK, Cao, S, Li, Y, Karpova, A, Liu, R, Zhao, Y, Shinkle, A, Strunilin, I, Weimholt, C, Sato, K, Yao, L, Serasanambati, M, Yang, X, Wyczalkowski, MA, Zhu, H, Zhou, DC, Jayasinghe, RG, Mendez, D, Wendl, MC, Clark, DJ, Newton, CJ, Ruan, Y, Reimers, MA, Pachynski, RK, Kinsinger, C, Jewell, SD, Chan, DW, Zhang, H, Chaudhuri, AA, Chheda, MG, Humphreys, BD, Mesri, M, Rodriguez, H, Hsieh, JJ, Ding, L, Chen, F Author Correction: Epigenetic and transcriptomic characterization reveals progression markers and essential pathways in clear cell renal cell carcinoma. Nat Commun 14(1), 2023. PMID: 37198186.
3. Bagchi, A, Beddows, I, Cornelius, AS, Robinson, G, Jewell, SD Rare cases of medulloblastoma with hypermutation. Cancer Rep (Hoboken) 5(5), 2022. PMID: 34351088.
4. Paulauskis JD, Blanc VM, Carey T, Chesla DW, Frey RC, Geddes T, Keats J, Loup A, Pruetz B, Rohrer DC, Valley DR, Tomlinson T, Akervall J, Wilson GD, Jewell SD Great Lakes Biorepository Research Network's Annual Biobanking Symposium: A Focus on Precision Medicine. Biopreserv Biobank 17(6):598-602, 2019. PMID: 31211591.
5. Stranger BE, Brigham LE, Hasz R, Hunter M, Johns C, Johnson M, Kopen G, Leinweber WF, Lonsdale JT, McDonald A, Mestichelli B, Myer K, Roe B, Salvatore M, Shad S, Thomas JA, Walters G, Washington M, Wheeler J, Bridge J, Foster BA, Gillard BM, Karasik E, Kumar R, Miklos M, Moser MT, Jewell SD, Montroy RG, Rohrer DC, Valley DR, Davis DA, Mash DC, Gould SE, Guan P, Koester S, Little A, Martin C, Moore HM, Rao A, Struewing JP, Volpi S, Hansen KD, Hickey PF, Rizzardi LF, Hou L, Liu Y, Molinie B, Park Y, Rinaldi N, Wang L, Wittenberghe NV, Claussnitzer M, Gelfand ET, Li Q, Linder S, Zhang R, Smith KS, Tsang EK, Chen LS, Demanelis K, Doherty JA, Jasmine F, Kibriya MG, Jiang L, Lin S, Wang M, Jian R, Li X, Chan J, Bates D, Diegel M, Halow J, Haugen E, Johnson A, Kaul R, Lee K, Maurano MT, Nelson J, Neri FJ, Sandstrom R, Fernando MS, Linke C, Oliva M, Skol A, Wu F, Akey JM, Feinberg AP, Li JB, Pierce BL, Stamatoyannopoulos JA, Tang H, Ardlie KG, Kellis M, Snyder MP, Montgomery SB Enhancing GTEx by bridging the gaps between genotype, gene expression, and disease. Nat Genet 49(12):1664-1670, 2017. PMID: 29019975.
6. Lonsdale J, Thomas J, Salvatore M, Phillips R, Lo E, Shad S, Hasz R, Walters G, Garcia F, Young N, Foster B, Moser M, Karasik E, Gillard B, Ramsey K, Sullivan S, Bridge J, Magazine H, Syron J, Fleming J, Siminoff L, Traino H, Mosavel M, Barker L, Jewell S, Rohrer D, Maxim D, Filkins D, Harbach P, Cortadillo E, Berghuis B, Turner L, Hudson E, Feenstra K, Sobin L, Robb J, Branton P, Korzeniewski G, Shive C, Tabor D, Qi L, Groch K, Nampally S, Buia S, Zimmerman A, Smith A, Burges R, Robinson K, Valentino K, Bradbury D, Cosentino M, Diaz-Mayoral N, Kennedy M, Engel T, Williams P, Erickson K, Ardlie K, Winckler W, Getz G, DeLuca D, MacArthur D, Kellis M, Thomson A, Young T, Gelfand E, Donovan M, Meng Y, Grant G, Mash D, Marcus Y, Basile M, Liu J, Zhu J, Tu Z, Cox NJ, Nicolae DL, Gamazon ER, Im HK, Konkashbaev A, Pritchard J, Stevens M, Flutre T, Wen X, Dermitzakis ET, Lappalainen T, Guigo R, Monlong J, Sammeth M, Koller D, Battle A, Mostafavi S, McCarthy M, Rivas M, Maller J, Rusyn I, Nobel A, Wright F, Shabalin A, Feolo M, Sharopova N, Sturcke A, Paschal J, Anderson JM, Wilder EL, Derr LK, Green ED, Struewing JP, Temple G, Volpi S, Boyer JT, Thomson EJ, Guyer MS, Ng C, Abdallah A, Colantuoni D, Insel TR, Koester SE, Little A, Bender PK, Lehner T, Yao Y, Compton CC, Vaught JB, Sawyer S, Lockhart NC, Demchok J, Moore HF The Genotype-Tissue Expression (GTEx) project. Nat Genet 45(6):580-5, 2013. PMID: 23715323.

Abstracts

1. Kresty LA, Stoner GD, Normolle D, Beer DG, Appelman H, Eaton T, Fromkes J, Sundaram U, Moselely R, Spechler S, Habib S, Nostrant T, Jewell SD. Chemoprevention in Esophageal Cancer. Proceedings AACR 41:223-224, 2000. e-Pub 2000.
2. Bhatt UY, McKeegan C, Urban K, Dakappagari N, Johnson A, Williams C, Sas J, Ellison J, Kaumaya PT, Jewell SD, Sferra TJ, Nahman Jr NS. Distribution of the coxasakie-adenovirus receptor protein in the human kidney. American Society of Gene Therapy, 2000. e-Pub 2000.
3. Jewell S, Hazard K. Mesenterico-caval shunt abrogates the induction of oral tolerance to myelin basic protein: Liver associated mechanisms in oral tolerance. FASEB J 13(4):Part 1, 1999. e-Pub 1999.
4. Jewell SD, Dierksheide J, Curry A, Shrestha AK. Suppression of experimental autoimmune encephalomyelitis (EAE) by portal vein (PV) injection of myelin basic protein (MBP). FASEB J 12:A600, 1998. e-Pub 1998.
5. Martin EW, Jewell SD, Hitchcock CL. Radioimmunoguided detection of colon cancer. Third International Oncology Conference, 1996. e-Pub 1996.
6. Jewell SD, Hazard KR, Shrestha AK. Effects on lymphocyte proliferation by human mucin isolated from colon cancer and normal colonic mucosa. Annual Conference on Clinical Immunology, 1996. e-Pub 1996.
7. Jewell SD, Edwards D, Houchens D, Eisenhardt W, Martin Jr E, Hitchcock C. Injection of a murine monoclonal antibody to the TAG-72 antigen leads to changes in lymphocyte subpopulations in the peripheral blood. FASEB J 9(4):A1045, 1995. e-Pub 1995.
8. Cordial C, Jewell SD, Hitchcock C, and Pellegrini A. Can nuclear DNA and proliferation markers be evaluated by image cytometry to objectively distinguish between malignant melanoma and spitz nevi?. J Cutan Pathol, 1995. e-Pub 1995.
9. Jewell SD, Cox K, Gienapp I, Whitacre C. Oral tolerance in Experimental autoimmune encephalomyelitis (EAE): Lack of demonstrable bystander suppression in lymphoid tissue 8:245A, 1994. e-Pub 1994.
10. Javed N, Jewell SD, Gienapp I, Cox K, Whitacre C. Oral tolerance in experimental autoimmune encephalomyelitis: Role of gastrointestinal lymphoid cells. FASEB J 8:245A, 1994. e-Pub 1994.
11. Fox CC, Jewell SD. Antigen presentation by highly enriched mast cell populations. J Immunol 150:145A, 1993. e-Pub 1993.
12. Whitacre C, Gienapp I, Cox K, Jewell SD, Javed N, Goldman S, Heber-Katz H. Oral tolerance in experimental autoimmune encephalomyelitis (EAE): T cell anergy. J Immunol 150:245A, 1993. e-Pub 1993.
13. Fox CC, Jewell SD. Rat peritoneal mast cells express MHC class II antigens. J Allergy Clin Immunol 91(1 (Part 2)):159, 1993. e-Pub 1993.
14. Whitacre CC, Apseloff G, Cox K, Matkovic V, Jewell SD, Gerber N. Suppression of experimental autoimmune encephalomyelitis (EAE) by gallium nitrate. FASEB J 6:4336, 1992. e-Pub 1992.
15. O'Dorisio SM, O'Dorisio TM, Jewell SD, Sirinek L, Qualman S, Harmel R. Intestinal transplantation: Model of neuropeptide modulation of mucosal immunity. FASEB J 5:7680, 1991. e-Pub 1991.
16. Allenby PA, Tuttle SE, O'Toole RV, Jewell SD. Demonstration of human papilloma virus in cervical lesions: In situ hybridization compared with immunohistochemistry. Am J Clin Pathol 91:358, 1989. e-Pub 1989.
17. Walker AH, Tuttle SE, Jewell SD, Bucci DM, Goodwin RA. A,B,H antigen expression in primary and autologous metastatic colon carcinomas: Evaluation of heterogenicity using monoclonal antibodies. Am J Clin Pathol 87:417, 1987. e-Pub 1987.
18. Zibas J, Tuttle SE, Bucci D, Oredipe L, Jewell SD, Greiner J, Primus J, Steplewski Z, Schlom J. Flow cytometric phenotyping of colon carcinoma cells using a panel of monoclonal antibodies: Alteration of membrane phenotype by alpha interferon. Int Acad Pathol Congress, 1987. e-Pub 1987.
19. Goodwin RA, Tuttle SE, Jewell SD, Bucci DM, Martin EW, Steplewski Z. Heterogeneity of gastrointestinal carcinoma associated antigen (19-9 AG) in primary and metastatic gastrointestinal tumors. Am J Clin Pathol 87:416, 1987. e-Pub 1987.
20. Barth RF, Oredipe OA, Tuttle SE, Adams DM, Bucci DM, Mojzisik CM, Hinkle GH, Jewell SD, Thurston MO, Martin EW, Steplewski Z. Relationship between tumor burden, antibody affinity, and radioimmunodetection of colon cancer. Covalently Modified Antigens and Antibodies in Diagnosis and Therapy, 1987. e-Pub 1987.
21. Porter D, Tuttle SE, Bucci DM, Jewell SD, Colcher D, Schlom J. Distribution of B72.3 antigen in primary and metastatic colorectal carcinoma. International Academy of Pathology Congress 1987, 1987. e-Pub 1987.
22. Hinkle G, Tuttle SE, Oreidpe O, Miller E, Jewell SD, Adams D, Rousseau M, Barth R, Houchens D, Steplewski Z, Thurston M, Martin E. Preferential localization of monoclonal antibody in human colon cancer xenografts: Relation to cell surface antigen density. American Association for Cancer Research (AACR), 1986. e-Pub 1986.
23. Oredipe OA, Barth RF, Tuttle SE, Houchens DP, Thurston MO, Hinkle GH, Mojzisik CM, Adams D, Sautins I, O'Dwyer P, Miller EA, Jewell SD, Bucci D, Ridihalgh J, Steplewski Z, Martin EW. The use of monoclonal antibodies directed against human colorectal cancer for radioimmunodetection by a handheld gamma probe. American Association for Cancer Research (AACR), 1986. e-Pub 1986.
24. Martin EW, Tuttle SE, Rousseau M, Mojzisik CM, O'Dwyer PJ, Hinkle GH, Miller EA, Goodwin RA, Oredipe OA, Barth RF, Olson JO, Houchens D, Jewell SD, Bucci DM, Adams D, Steplewski Z, Thurston MO. Radioimmunoguided surgery with monoclonal antibodies in colorectal cancer. Wistar Symposium; Immunodiagnosis and immunotherapy with CO17-1A monoclonal antibody in gastrointestinal cancer, 1986. e-Pub 1986.
25. Tuttle SE, Barth RF, Hinkle GH, Thurston MO, Oredipe O, Bucci DM, Mojzisik CM, O'Dwyer PJ, Miller E, Adams D, Jewell SD, Houchens D, Steplewski Z, Martin EW. Intra-operative gamma probe localization of radiolabeled monoclonal antibody directed against human colon carcinoma. International Conference on Monoclonal Antibody Immunoconjugates for Cancer, 1986. e-Pub 1986.
26. Jewell SD, Rohrer DC, Blanc V, Carey TE, Tomlinson T, Pruetz B, Akervall J, Wilson G. Great Lakes Biorepository Research Network (GLBRN) in Action. International Society for Biological and Environmental Repositories (ISBER) 2017 Annual Meeting: Due North: Aligning Biobanking Practice with Evolving Evidence and Innovation.
27. Johnson AB, Wick MP, Bhatt UY, Williams C, Sas J, Shie S, Jewell SD, Sferra TJ, Nahman Jr NS. Adenoviral- microsphere complexes for glomerular gene delivery: Potential ischemic and inflammatory events following microparticle embolization. Ohio State University, Depts. Of Medicine, Animal Sciences, Pediatrics, and Pathology.
28. Jewell SD, Williams N, McCart LM, Ward BS, Sedmak DD. Analysis of the molecular quality of tissue specimens from the Cooperative Human Tissue Network (CHTN). International Society for Biological and Environmental Repositories (ISBER) 2001 Annual Meeting.
29. Srinivasan M, Long S, Yearsley K, Hout B, Jewell SD. Importance of fixation and storage in the molecular quality of tissue. Exp Biology 2003.
30. Hitchcock C, Jewell SD. Use of virtual slide technology in diagnosis and teaching. 3rd Croatian Congress of Pathology.
31. Edelman MJ, Watson DM, Wang X, Kratzke RA, Mauer AM, Jewell SD, Graziano SL, Masters GA, Bedor MM, Green MR. EE Vokes for the CALGB Randomized phase II trial of eicosanoid modulator pathways in advanced non-small cell lung cancer. American Association of Clinical Oncology.
32. Hostetter G, Syring M, Watanabe A, Buchholz S, Trent J, Jewell SD, Duggan D, Carpten J. Tumor heterogeneity and high content assays: importance of tissue chain of custody. 4th Annual Biospecimen Research Network (BRN) Symposium: Advancing Cancer Research Through Biospecimen Science.
33. Barney T, Resau J, Jewell SD, Campbell B, Christ N, Hawkins H. Neonatal Blood Spot Card Biorepository Sample Processing. International Society for Biological and Environmental Repositories (ISBER) 2011 Annual Meeting.
34. Jewell SD, Rohrer D, Maxim D, Berghuis B, Turner L, Harbach P, Feenstra K, Hudson E, Selinsky C, Trent J, Buia S, Zimmerman A, Burges R, Shive C, Smith A, Tabor D, Korzeniewski G, Sobin L, Madden J, Lockhart N, Sawyer S, Branton P, Vaught J, Compton C. Comprehensive Biospecimen Resource for the caHUB. International Society for Biological and Environmental Repositories (ISBER) 2012 Annual Meeting.
35. Jewell SD, Rohrer D, Khoo SK, Hilsabeck R, Maxim D, Kidd P, Collison K, Selinsky C, Carpten J, Keats J, Trent J, Perkins L, Hoban C. Biospecimen Resource for the Multiple Myeloma Research Foundation CoMMpass SM Study. International Society for Biological and Environmental Repositories (ISBER) 2012 Annual Meeting.
36. Hostetter G, Varlan P, Berghuis B, Turner L, Beck J, Khoo SK, Monsma D, Jewell SD. Assessment of RNA Quality in PAXgene-Fixed Paraffin-Embedded (PFPE) Tissue. GTEx Annual Meeting.
37. Collins E, Beck J, Monsma D, Dylewski D, Borgman A, Winn M, Turner L, Judson C, Hostetter G, Jewell SD. Illuminating the effects of tissue degradation: Improving the management of tissues used in cancer research or clinical applications. American Association for Cancer Research (AACR).
38. Valley D, DeHollander M, McPeak E, Harbach P, Rohrer D, Jewell SD. The Impact of a Comprehensive Quality Management Program, RS-21. International Society for Biological and Environmental Repositories (ISBER) 2014 Annual Meeting.
39. Rohrer D, Valley D, Berghuis B, Maxim D, Buia S, Smith A, Valentino K, Zimmerman A, Korzeniewski G, Burges R, Carithers L, Guan P, Rao A, Vaught J, Sawyer S, Moore H, Jewell SD. Biorepository Management as the Comprehensive Biospecimen Resource (CBR) for the National Cancer Institute’s (NCI) cancer Human Biobank (caHUB). International Society for Biological and Environmental Repositories (ISBER) 2014 Annual Meeting.
40. Jewell SD, Rohrer D, Blanski A, Hodges M, Hudson E, Harbach P, Berghuis B, Hilsabeck R, Kidd P, Collision K, Keats J, Auclair D, Carpten J. The Van Andel Research Institute’s Program for Biospecimen Science Biorepository Management for the Multiple Myeloma Research Foundation’s CoMMpass Clinical Trial, HSR-6. International Society for Biological and Environmental Repositories (ISBER) 2014 Annual Meeting.
41. Hostetter G, Barney T, Resau J, Collins E, Turner L, Berghuis B, Wang X, Joynt C, Sinha A, Feinstein T, Cherba D, Winn M, Sempere L, Haab B, Jewell S. A Tissue Microarray Study to Characterize Macrophages in Colorectal Cancer. Van Andel Research Institute Scientific Retreat.
42. Lonial S, Yellapantula V, Liang W, Kurdoglu A, Russell M, Christofferson A, Aldrich J, Legendre C, Stephenson K, Cuyugan L, Adkins J, McDonald J, Helland A, Blanski A, Rohrer D, Derome M, Auclair D, Kidd P, Jewell SD, Craig D, Carpten J, Keats J. Interim Analysis of the MMRF CoMMpass Trial: Identification of Novel Rearrangements Potentially Associated with Disease Initiation and Progression. 56th Meeting of the American Society of Hematology (ASH).
43. Carithers L, Agarwal R, Barcus M, Branton P, Burges R, Guan P, Hostetter G, Jewell SD, Odeh H, Roche N, Sachs M, Smith A, Sobin L, Soria C, Valentino K, Winn M, Moore H. Emerging Results from the NCI Biospecimen Pre-analytical Variables (BPV) Program. National Cancer Research Institute, Leidos Biomedical Research, Van Andel Research Institute.
44. Collins E, Hostetter G, Jeltema D, Eugster E, Borgman A, Winn M, Monsma D, Zhang B, Liu M, Ramjan Z, Jewell SD, Pfeifer G. Comprehensive and Targeted Genomics: VARI Core Services. Van Andel Research Institute Scientific Retreat.
45. Guan P, Agarwal R, Odeh H, Carithers L, Jones W, Brown C, Jasper J, Barcus M, Bavarva J, Burges R, Branton P, Camalier C, Das B, Lih J, Roche N, Sachs D, Sobin L, Jewell S, Smith A, Soria C, Valentino K, Valley D, Williams M, Moore H. Pre-analytical Impacts on RNA and DNA Quality and Next Generation Sequencing from Formalin-Fixed Paraffin Embedded (FFPE) Tumor Tissue. National Cancer Institute, BPV Face-to-Face Meeting.
46. Manojlovic Z, Christofferson A, Legendre C, Speyer G, Kim S, Liang W, Mulligan G, Kidd P, Jewell SD, Derome M, Troups J, Auclair D, Lonial S, Craig D, Keats J, Carpten J. In-Depth Molecular Profiling of Multiple Myeloma in African Americans. 57th American Society of Hematology (ASH) Annual Meeting & Exposition.
47. Guan P, Agarwal R, Odeh H, Carithers L, Jones W, Brown C, Jasper J, Barcus M, Bavara J, Burges R, Branton P, Camalier C, Das B, Lih J, Roche N, Rohrer D, Sachs M, Sobin L, Jewell S, Smith A, Soria C, Valentino K, Valley D, Williams M, Moore H. Pre-analytical Impacts on RNA and DNA Quality and Next Generation Sequencing from Formalin-Fixed Paraffin Embedded (FFPE) Tumor Tissue. International Society for Biological and Environmental Repositories (ISBER) 2016 Annual Meeting: Breaking Down Walls: Unifying Biobanking Communities to Secure Our Sustainability.
48. Shea K, Ramirez N, Branton P, Abbott S, Blanc V, Dash R, Dry S, Gastier-Foster J, Jewell S, McCall S, Rose J, Yeransian N. The CAP Biorepository Accreditation Program: Results from the First Four Years of the Program. International Society for Biological and Environmental Repositories (ISBER) 2016 Annual Meeting: Breaking Down Walls: Unifying Biobanking Communities to Secure Our Sustainability.
49. Agarwal R, Carithers L, Odeh H, Branton P, Barcus M, Roche N, Burges R, Smith A, Valentino K, Soria C, Bavarva J, Sobin L, Lih J, Williams M, Camalier C, Das B, Sachs M, Rohrer D, Jewell S, Valley D. Impact of Biospecimen Pre-Analytical Factors on Molecular Analysis. American Association for Cancer Research (AACR) Annual Meeting.
50. Valley DR, Rohrer DC, Jewell SD, Guan P, Moore HM. Biospecimen Pre-analytical Variables (BPV) Program Sample Collection Availability. International Society for Biological and Environmental Repositories (ISBER) 2017 Annual Meeting: Due North: Aligning Biobanking Practice with Evolving Evidence and Innovation.
51. Ammerlaan W, Mathay C, Mommaerts K, Trouet J, Kovanova OA, Bellora C, Frasquilho S, Iambert P, Rohrer D, Valley DR, Blanski A, Jewell SD, Sachs M, Guan P, Mathieson W, Moore H, Betsou F. RNA and miRNA Expression Profiles in FFPE Tissues Subjected to Extended Ischemic and Formalin-Fixation Times. International Society for Biological and Environmental Repositories (ISBER) 2017 Annual Meeting: Due North: Aligning Biobanking Practice with Evolving Evidence and Innovation.

Book Chapters

1. Jewell, S, Madeleine, A, Williams, MA. Regulatory Considerations for Research Biorepositories. In: Cellular Therapy: Principles, Methods, and Regulations. 2nd. American Association of Blood Banks (AABB), 510-519, 2016.
2. Pan T, Jewell S, Catalyurek U, Wenzel P, Leone G, Hastings S, Oster S, Langella S, Kurc T, Saltz J, Cowden D. Virtual microscopy: Distributed image storage, retrieval, analysis, and visualization. In: Parallel Computing for Bioinformatics and Computational Biology. John Wiley and Sons, Inc, 737-763, 2005.

Books (edited and written)

1. Hansel DE, Jewell SD. Developing and Organizing an Institutional Biospecimen Repository. College of American Pathologist (CAP) Press, 2016.